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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs6473614 chr8:52445492 A/G 0 490 16.4 14.38 7.3 KM Plot
THCA rs6473615 chr8:52445595 C/T 0 489 16.38 14.55 7.3 KM Plot
THCA rs6474979 chr9:15858338 G/A 0.000155 489 8.95 16.32 15.83 KM Plot
THCA rs6492978 chr15:41317702 T/C 0.000275 490 14.57 16.8 16.62 KM Plot
THCA rs6492993 chr15:41526104 G/A 0.000249 480 15.15 15.83 17.7 KM Plot
THCA rs6492994 chr15:41529324 T/C 0.000251 479 15.17 15.83 17.7 KM Plot
THCA rs6492997 chr15:41541171 G/A 0.000214 483 15.15 15.93 17.63 KM Plot
THCA rs6501743 chr17:72936025 G/T 0.000105 490 15.9 16.38 12.7 KM Plot
THCA rs6512118 chr19:16651433 T/C 0.000252 486 10.97 17.23 15.3 KM Plot
THCA rs6512120 chr19:16670895 T/C 0.000249 487 10.97 17.43 15.3 KM Plot
THCA rs6517144 chr21:34498087 C/T 2.39E-6 490 16.8 13.9 10.35 KM Plot
THCA rs6545018 chr2:48304381 C/T 2.05E-5 485 14.77 17.55 14.55 KM Plot
THCA rs6545021 chr2:48343949 A/G 9.16E-6 490 14.3 17.55 14.77 KM Plot
THCA rs6545466 chr2:55228392 C/T 0.000187 482 13.23 15.63 17.88 KM Plot
THCA rs6547883 chr2:29049762 T/G 9.62E-5 489 15.93 17.08 14.3 KM Plot